diff --git a/scripts/plotting/plotting_data.R b/scripts/plotting/plotting_data.R index 9ecc2a7..6f6c3ec 100755 --- a/scripts/plotting/plotting_data.R +++ b/scripts/plotting/plotting_data.R @@ -89,16 +89,39 @@ cat("\nNo. of unique mutational positions:"); cat(length(upos), "\n") ########################### -# extract mutations <10Angstroms +# extract mutations <10Angstroms and symbols ########################### table(my_df_u$ligand_distance<10) my_df_u_lig = my_df_u[my_df_u$ligand_distance <10,] + + +#================== +# Angstroms symbol +#================== + angstroms_symbol = "\u212b" cat(paste0("There are ", nrow(my_df_u_lig), " sites lying within 10", angstroms_symbol, " of the ligand\n")) +#================== +# Delta symbol +#================== + delta_symbol = "\u0394"; delta_symbol +########################### +# variables for my cols +########################### + +mcsm_red2 = "#ae301e" # most negative +mcsm_red1 = "#f8766d" + +mcsm_mid = "white" # middle + +mcsm_blue1 = "#00bfc4" +mcsm_blue2 = "#007d85" # most positive + + ######################################################################## # end of data extraction and cleaning for plots # ########################################################################