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Tanushree Tunstall 2022-09-06 21:35:59 +01:00
parent 23bb087ea3
commit ade1739753
3 changed files with 27 additions and 10 deletions
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5
scripts/plotting/plotting_thesis/katg/katg_lineage_diff_sensitivities.R
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@ -28,6 +28,11 @@ sel_lin_snps_n = length(sel_lin_snps); sel_lin_snps_n
sel_lin_samples_id = unique(df2_lin$id)
sel_lin_samples_id_n = length(sel_lin_samples_id);sel_lin_samples_id_n
sel_df_u = df2[df2$id%in%sel_lin_samples_id,]
# are the snps that are not in L1-L4 unique to L5-L7
left_snps = all_snps[!all_snps%in%sel_lin_snps]
left_snps_n = length(left_snps); left_snps_n