added test2/ for testing updated foldx script

scripts/temp_results.py

@@ -0,0 +1,34 @@
+#!/usr/bin/env python3
+# -*- coding: utf-8 -*-
+"""
+Created on Thu Nov 12 15:20:32 2020
+
+@author: tanu
+"""
+print('============================================'
+      , '\nQuick summary output for', drug, 'and' , gene.lower()
+      , '\n============================================'
+      , '\nTotal samples:', total_samples
+      , '\nNo. of Sus and Res', drug, 'samples:\n', meta_data[drug].value_counts()
+	  , '\n'
+      , '\nPercentage of Sus and Res', drug, 'samples:\n', meta_data[drug].value_counts(normalize = True)*100
+	  , '\n'
+      , '\nTotal no.of unique dr muts:', mut_grouped[dr_muts_col]
+      , '\nTotal no.of unique other muts:', mut_grouped[other_muts_col]     
+      , '\nTotal no.of unique missense muts:', gene_LF1['mutationinformation'].nunique()
+      , '\nTotal no.of unique positions associated with missense muts:',gene_LF1['position'].nunique()
+      , '\nTotal no. of samples with missense muts:', len(gene_LF1)
+      , '\nTotal no. of unique samples with missense muts:', gene_LF1['id'].nunique()  
+      , '\n'
+      , '\nTotal no.of samples with common_ids:',  nu_common_ids['id']
+      , '\nTotal no.of samples with ambiguous muts:', len(inspect)
+      #, '\nTotal no.of unique ambiguous muts:', len(common_muts)
+      , '\nTotal no.of unique ambiguous muts:', inspect['mutation'].nunique()
+      , '\n============================================================='
+      , '\n\n\n')
+
+print('\n----------------------------------'
+      , '\nWriting subsetted gwas data:', gene
+      , '\n----------------------------------'
+      , '\nFile', check_file
+      , '\nDim:', meta_data.shape)