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just running for pnca

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Tanushree Tunstall 2022-07-27 17:11:30 +01:00
parent 744bc8f4a1
commit a6532ddfa3
1 changed files with 4 additions and 4 deletions
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8
scripts/ml/ml_iterator.py
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@ -42,10 +42,10 @@ gene_model_paramD = {'data_combined_model' : False
#ml_genes = ["pncA", "embB", "katG", "rpoB", "gid"] #ml_genes = ["pncA", "embB", "katG", "rpoB", "gid"]
ml_gene_drugD = {'pncA' : 'pyrazinamide' ml_gene_drugD = {'pncA' : 'pyrazinamide'
, 'embB' : 'ethambutol' # , 'embB' : 'ethambutol'
, 'katG' : 'isoniazid' # , 'katG' : 'isoniazid'
, 'rpoB' : 'rifampicin' # , 'rpoB' : 'rifampicin'
, 'gid' : 'streptomycin' # , 'gid' : 'streptomycin'
} }
gene_dataD={} gene_dataD={}
split_types = ['70_30', split_types = ['70_30',