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renamed count_vars_ML previous version as such

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Tanushree Tunstall 2022-08-31 22:02:16 +01:00
parent 14e655eeeb
commit a5d22540e1
9 changed files with 336 additions and 185 deletions
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7
scripts/plotting/plotting_thesis/alr/gg_pairs_all_alr.R
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@ -1,12 +1,13 @@
source("~/git/LSHTM_analysis/config/alr.R")
source("~/git/LSHTM_analysis/scripts/plotting/get_plotting_dfs.R")
source("~/git/LSHTM_analysis/scripts/plotting/plotting_colnames.R")
#=======
# output
#=======
outdir_images = paste0("~/git/Writing/thesis/images/results/", tolower(gene), "/")
#outdir_images = paste0("/home/pub/Work/LSHTM/Thesis_Plots/pairs/")
#cat("plots will output to:", outdir_images)
cat("plots will output to:", outdir_images)
custom_cor <- function(
data,
@ -190,7 +191,7 @@ unmasked_vals
# Stability
#================
corr_ps_colnames = c(static_cols
, "DUET"
, "mCSM-DUET"
, "FoldX"
, "DeepDDG"
, "Dynamut2"