From a2e7e6c26b08a2982342b0aed22dee5d8817f57e Mon Sep 17 00:00:00 2001
From: Tanushree Tunstall <tanu@tunstall.in>
Date: Mon, 22 Aug 2022 23:11:42 +0100
Subject: [PATCH] plerts

---
 .../plotting/plotting_thesis/katg/dm_om_plots_layout_katg.R  | 5 +----
 scripts/plotting/plotting_thesis/katg/gg_pairs_all_katg.R    | 2 +-
 2 files changed, 2 insertions(+), 5 deletions(-)

diff --git a/scripts/plotting/plotting_thesis/katg/dm_om_plots_layout_katg.R b/scripts/plotting/plotting_thesis/katg/dm_om_plots_layout_katg.R
index dd9c554..b8994bd 100644
--- a/scripts/plotting/plotting_thesis/katg/dm_om_plots_layout_katg.R
+++ b/scripts/plotting/plotting_thesis/katg/dm_om_plots_layout_katg.R
@@ -13,7 +13,6 @@ snap2P
 mcsmligP
 mcsmlig2P
 mcsmppi2P
-mcsmnaP
 
 # Plot labels
 tit1 = "Stability changes"
@@ -107,8 +106,7 @@ OutPlot_dm_om = function(x){
     cowplot::plot_grid(pt3, 
                        cowplot::plot_grid( #distanceP
                          distanceP_lig
-                         #, distanceP_ppi2
-                         , distanceP_na
+                         , distanceP_ppi2
                          , nrow = 1
                          , labels = c("F", "G")
                          , label_size = my_label_size)
@@ -135,7 +133,6 @@ OutPlot_dm_om = function(x){
                        cowplot::plot_grid(mcsmligP
                                           , mcsmlig2P
                                           , mcsmppi2P
-                                          , mcsmnaP
                                           , nrow = 1
                                           , labels = c("K", "L", "M")
                                           , label_size = my_label_size)
diff --git a/scripts/plotting/plotting_thesis/katg/gg_pairs_all_katg.R b/scripts/plotting/plotting_thesis/katg/gg_pairs_all_katg.R
index 2bc7b89..b855756 100644
--- a/scripts/plotting/plotting_thesis/katg/gg_pairs_all_katg.R
+++ b/scripts/plotting/plotting_thesis/katg/gg_pairs_all_katg.R
@@ -72,7 +72,7 @@ if (tolower(gene)%in%geneL_ppi2){
 }
 
 if (tolower(gene)%in%geneL_na){
-  corr_affinity_df[corr_affinity_df["NCA-Dist"]>DistCutOff,"mCSM-NA"]=0
+  corr_affinity_df[corr_affinity_df["NA-Dist"]>DistCutOff,"mCSM-NA"]=0
 }
 
 # count 0