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saving work after correlation plots

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Tanushree Tunstall 2020-09-09 20:56:07 +01:00
parent 9476fac83b
commit a04c3d6b0d
1 changed files with 3 additions and 0 deletions
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scripts/plotting/corr_plots.R
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@ -80,6 +80,8 @@ rm( merged_df2, merged_df2_comp, merged_df2_lig, merged_df2_comp_lig, my_df_u, m
#=========================== #===========================
# Data for Correlation plots:PS # Data for Correlation plots:PS
#=========================== #===========================
table(df_ps$duet_outcome)
# adding log cols # adding log cols
df_ps$log10_or_mychisq = log10(df_ps$or_mychisq) df_ps$log10_or_mychisq = log10(df_ps$or_mychisq)
df_ps$neglog_pval_fisher = -log10(df_ps$pval_fisher) df_ps$neglog_pval_fisher = -log10(df_ps$pval_fisher)
@ -172,6 +174,7 @@ dev.off()
#=========================== #===========================
# Data for Correlation plots: LIG # Data for Correlation plots: LIG
#=========================== #===========================
table(df_lig$ligand_outcome)
df_lig$log10_or_mychisq = log10(df_lig$or_mychisq) df_lig$log10_or_mychisq = log10(df_lig$or_mychisq)
df_lig$neglog_pval_fisher = -log10(df_lig$pval_fisher) df_lig$neglog_pval_fisher = -log10(df_lig$pval_fisher)