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This commit is contained in:
Tanushree Tunstall 2022-08-05 18:14:02 +01:00
parent 57433607bc
commit 92fba43dc1
1 changed files with 3 additions and 1 deletions
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scripts/functions/dm_om_data.R
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@ -92,7 +92,8 @@ dm_om_wf_lf_data <- function(df
, "log10_or_mychisq" , "neglog_pval_fisher" , "maf" #"af" , "log10_or_mychisq" , "neglog_pval_fisher" , "maf" #"af"
, "ddg_dynamut2" , "ddg_dynamut2_scaled", "ddg_dynamut2_outcome" , "ddg_dynamut2" , "ddg_dynamut2_scaled", "ddg_dynamut2_outcome"
, "mcsm_ppi2_affinity" , "mcsm_ppi2_scaled" , "mcsm_ppi2_outcome" , "mcsm_ppi2_affinity" , "mcsm_ppi2_scaled" , "mcsm_ppi2_outcome"
, "consurf_score" , "consurf_scaled" , "consurf_outcome" # exists now , "consurf_score" , "consurf_scaled" , "consurf_outcome"
, "consurf_colour_rev" # exists now
, "snap2_score" , "snap2_scaled" , "snap2_outcome" , "snap2_score" , "snap2_scaled" , "snap2_outcome"
, "mcsm_na_affinity" , "mcsm_na_scaled" , "mcsm_na_outcome" , "mcsm_na_affinity" , "mcsm_na_scaled" , "mcsm_na_outcome"
, "provean_score" , "provean_scaled" , "provean_outcome") , "provean_score" , "provean_scaled" , "provean_outcome")
@ -168,6 +169,7 @@ new_colnames = c(asa = "ASA"
, mcsm_na_scaled = mcsm_na_dn , mcsm_na_scaled = mcsm_na_dn
, mcsm_ppi2_scaled = mcsm_ppi2_dn , mcsm_ppi2_scaled = mcsm_ppi2_dn
, consurf_scaled = consurf_dn , consurf_scaled = consurf_dn
#, consurf_colour_rev = consurf_dn
, snap2_scaled = snap2_dn , snap2_scaled = snap2_dn
, provean_scaled = provean_dn) , provean_scaled = provean_dn)