From 91e868736c0aeb4b71b0835fa6c507800081e252 Mon Sep 17 00:00:00 2001 From: Tanushree Tunstall Date: Fri, 17 Jun 2022 18:27:20 +0100 Subject: [PATCH] changed dir to allow ml script to import functions --- scripts/ml/alr_config.py | 4 ++-- scripts/ml/embb_config.py | 4 ++-- scripts/ml/gid_config.py | 4 ++-- scripts/ml/katg_config.py | 4 ++-- scripts/ml/rpob_config.py | 4 ++-- 5 files changed, 10 insertions(+), 10 deletions(-) diff --git a/scripts/ml/alr_config.py b/scripts/ml/alr_config.py index fa3d91e..55a82eb 100755 --- a/scripts/ml/alr_config.py +++ b/scripts/ml/alr_config.py @@ -13,7 +13,7 @@ drug = 'cycloserine' #total_mtblineage_uc = 8 homedir = os.path.expanduser("~") -os.chdir( homedir + '/git/ML_AI_training/') +os.chdir( homedir + '/git/LSHTM_analysis/scripts/ml/') #--------------------------- # Version 1: no AAindex @@ -30,7 +30,7 @@ from ml_data import * #from UQ_yc_RunAllClfs import run_all_ML # TT run all ML clfs: baseline mode -from UQ_MultModelsCl import MultModelsCl +from MultModelsCl import MultModelsCl #%%########################################################################### diff --git a/scripts/ml/embb_config.py b/scripts/ml/embb_config.py index 57193c8..be4d609 100755 --- a/scripts/ml/embb_config.py +++ b/scripts/ml/embb_config.py @@ -13,7 +13,7 @@ drug = 'ethambutol' #total_mtblineage_uc = 8 homedir = os.path.expanduser("~") -os.chdir( homedir + '/git/ML_AI_training/') +os.chdir( homedir + '/git/LSHTM_analysis/scripts/ml/') #--------------------------- # Version 1: no AAindex @@ -30,7 +30,7 @@ from ml_data import * #from UQ_yc_RunAllClfs import run_all_ML # TT run all ML clfs: baseline mode -from UQ_MultModelsCl import MultModelsCl +from MultModelsCl import MultModelsCl #%%########################################################################### diff --git a/scripts/ml/gid_config.py b/scripts/ml/gid_config.py index dfdc157..73594af 100755 --- a/scripts/ml/gid_config.py +++ b/scripts/ml/gid_config.py @@ -13,7 +13,7 @@ drug = 'streptomycin' #total_mtblineage_uc = 8 homedir = os.path.expanduser("~") -os.chdir( homedir + '/git/ML_AI_training/') +os.chdir( homedir + '/git/LSHTM_analysis/scripts/ml/') #--------------------------- # Version 1: no AAindex @@ -30,7 +30,7 @@ from ml_data import * #from UQ_yc_RunAllClfs import run_all_ML # TT run all ML clfs: baseline mode -from UQ_MultModelsCl import MultModelsCl +from MultModelsCl import MultModelsCl #%%########################################################################### diff --git a/scripts/ml/katg_config.py b/scripts/ml/katg_config.py index cfe9a84..59cf24a 100755 --- a/scripts/ml/katg_config.py +++ b/scripts/ml/katg_config.py @@ -13,7 +13,7 @@ drug = 'isoniazid' #total_mtblineage_uc = 8 homedir = os.path.expanduser("~") -os.chdir( homedir + '/git/ML_AI_training/') +os.chdir( homedir + '/git/LSHTM_analysis/scripts/ml/') #--------------------------- # Version 1: no AAindex @@ -30,7 +30,7 @@ from ml_data import * #from UQ_yc_RunAllClfs import run_all_ML # TT run all ML clfs: baseline mode -from UQ_MultModelsCl import MultModelsCl +from MultModelsCl import MultModelsCl #%%########################################################################### diff --git a/scripts/ml/rpob_config.py b/scripts/ml/rpob_config.py index d5b77d0..15a4cec 100755 --- a/scripts/ml/rpob_config.py +++ b/scripts/ml/rpob_config.py @@ -13,7 +13,7 @@ drug = 'rifampicin' #total_mtblineage_uc = 8 homedir = os.path.expanduser("~") -os.chdir( homedir + '/git/ML_AI_training/') +os.chdir( homedir + '/git/LSHTM_analysis/scripts/ml/') #--------------------------- # Version 1: no AAindex @@ -30,7 +30,7 @@ from ml_data import * #from UQ_yc_RunAllClfs import run_all_ML # TT run all ML clfs: baseline mode -from UQ_MultModelsCl import MultModelsCl +from MultModelsCl import MultModelsCl #%%###########################################################################