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fixed white space prob with mcsm input with merge

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This commit is contained in:
Tanushree Tunstall 2020-07-14 14:07:23 +01:00
parent 5a2084ba11
commit 8dc2fa7326
6 changed files with 108 additions and 98 deletions
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18
scripts/or_kinship_link.py
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@ -46,18 +46,18 @@ args = arg_parser.parse_args()
#drug = 'pyrazinamide'
#start_cds = 2288681
#end_cds = 2289241
# cmd variables
gene = args.gene
drug = args.drug
#%%=====================================================================
# Command line options
gene = args.gene
drug = args.drug
gene_match = gene + '_p.'
datadir = args.datadir
indir = args.input_dir
outdir = args.output_dir
datadir = args.datadir
indir = args.input_dir
outdir = args.output_dir
start_cds = args.start_coord
end_cds = args.end_coord
start_cds = args.start_coord
end_cds = args.end_coord
#%%=======================================================================
#==============