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renamed 2 to _v2

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This commit is contained in:
Tanushree Tunstall 2022-08-22 10:53:25 +01:00
parent 802d6f8495
commit 8d6c148fff
7 changed files with 74 additions and 588 deletions
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2
scripts/plotting/get_plotting_dfs.R
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@ -53,6 +53,7 @@ if (!exists("infile_params") && exists("gene")){
cat("\nReading mcsm combined data file: ", infile_params)
mcsm_df = read.csv(infile_params, header = T)
pd_df = plotting_data(mcsm_df
, gene = gene # ADDED
, lig_dist_colname = LigDist_colname
, lig_dist_cutoff = LigDist_cutoff)
@ -87,6 +88,7 @@ cat("\nDim of meta data file: ", dim(gene_metadata))
all_plot_dfs = combining_dfs_plotting(my_df_u
, gene_metadata
, gene = gene # ADDED
, lig_dist_colname = LigDist_colname
, lig_dist_cutoff = LigDist_cutoff)