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minor var bame update in ml_iterator

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This commit is contained in:
Tanushree Tunstall 2022-07-09 10:52:50 +01:00
parent 8079dd7b6c
commit 8bde6f0640
3 changed files with 39 additions and 37 deletions
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13
scripts/ml/ml_functions/test_func_singlegene.py
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@ -45,10 +45,13 @@ spl_type = '70_30'
#spl_type = '80_20'
#spl_type = 'sl'
#data_type = "actual"
data_type = "complete"
df2 = split_tts(df
, data_type = 'actual'
, data_type = data_type
, split_type = spl_type
, oversampling = False
, oversampling = True
, dst_colname = 'dst'
, target_colname = 'dst_mode'
, include_gene_name = True
@ -67,8 +70,8 @@ Counter(df2['y'])
Counter(df2['y_bts'])
fooD = MultModelsCl(input_df = df2['X']
, target = df2['y']
fooD = MultModelsCl(input_df = df2['X_ros']
, target = df2['y_ros']
, sel_cv = skf_cv
, run_blind_test = True
, blind_test_df = df2['X_bts']
@ -83,7 +86,7 @@ fooD = MultModelsCl(input_df = df2['X']
for k, v in fooD.items():
print('\nModel:', k
, '\nTRAIN MCC:', fooD[k]['test_mcc']
, '\nBTS MCC:' , fooD[k]['bts_mcc']
, '\nBTS MCC:' , fooD[k]['bts_mcc']
, '\nDIFF:',fooD[k]['bts_mcc'] - fooD[k]['test_mcc'] )
#%% CHECK SCALING