tanu/LSHTM_analysis
1
0
Fork 0
Code Issues Pull requests Releases Wiki Activity

adding commands for use of pdbtools

Browse source
This commit is contained in:
Tanushree Tunstall 2020-05-12 12:50:49 +01:00
parent b28d866237
commit 7f66d5d19e
2 changed files with 11 additions and 2 deletions
Download patch file Download diff file Expand all files Collapse all files

9
scripts/pdbtools_commands Normal file
View file

@ -0,0 +1,9 @@
# renumber
home/tanu/git/LSHTM_analysis/scripts/pdbtools/scripts/pdb_residue_renumber /home/tanu/git/Data/cycloserine/input/alr_complex_model.pdb -s 35 -r
/home/tanu/git/LSHTM_analysis/scripts/pdbtools/scripts/pdb_residue_renumber /home/tanu/git/Data/rifampicin/input/rpob_complex_model.pdb -s 29 -r
# extract seq from structure
/home/tanu/git/LSHTM_analysis/scripts/pdbtools/scripts/pdb_seq -a /home/tanu/git/Data/ethambutol/input/3byw.pdb > 3byw_seq.txt