diff --git a/scripts/my_pdbtools/pdbtools_commands b/scripts/my_pdbtools/pdbtools_commands
deleted file mode 100644
index 3ea7bf1..0000000
--- a/scripts/my_pdbtools/pdbtools_commands
+++ /dev/null
@@ -1,5 +0,0 @@
-#======================================================
-# pdb_seq.py: extract seq from structure
-#======================================================
-~/git/LSHTM_analysis/scripts/my_pdbtools/pdbtools/scripts/pdb_seq -c B -a <input> > <output>
-