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fixed cmd running script problem for logo plots

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Tanushree Tunstall 2021-06-24 12:12:36 +01:00
parent e822f9f690
commit 762b1a3931
14 changed files with 206 additions and 748 deletions
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scripts/plotting/logo_plot.R
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@ -68,7 +68,7 @@ if (!is.character(infile_params) && exists("gene")){ # when running as cmd
cat("\nReading mcsm combined data file: ", infile_params)
mcsm_df = read.csv(infile_params, header = T)
pd_df = plotting_data(mcsm_df)
my_df_u = pd_df[[1]] # this forms one of the input for combining_dfs_plotting()
my_df_u = pd_df[[2]] # this forms one of the input for combining_dfs_plotting()
#--------------------------------
# call: combining_dfs_plotting()