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fixed cmd running script problem for logo plots

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Tanushree Tunstall 2021-06-24 12:12:36 +01:00
parent e822f9f690
commit 762b1a3931
14 changed files with 206 additions and 748 deletions
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4
scripts/functions/plotting_data.R
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@ -103,9 +103,9 @@ cat("\nNo. of unique mutational positions:"); cat(length(upos), "\n")
#===============================================
# extract mutations <10 Angstroms and symbol
#===============================================
table(my_df_u$ligand_distance<lig_dist_cutoff)
table(my_df_u[[lig_dist_colname]] < lig_dist_cutoff)
my_df_u_lig = my_df_u[my_df_u$ligand_distance <lig_dist_cutoff,]
my_df_u_lig = my_df_u[my_df_u[[lig_dist_colname]] < lig_dist_cutoff,]
cat(paste0("There are ", nrow(my_df_u_lig), " sites lying within 10\u212b of the ligand\n"))