tanu/LSHTM_analysis
1
0
Fork 0
Code Issues Pull requests Releases Wiki Activity

saving work for the day after massive repurpose

Browse source
This commit is contained in:
Tanushree Tunstall 2021-09-15 19:48:56 +01:00
parent 1d16c6848e
commit 746889b075
1 changed files with 3 additions and 8 deletions
Download patch file Download diff file Expand all files Collapse all files

11
scripts/plotting/get_plotting_dfs.R
View file

@ -1,26 +1,21 @@
#!/usr/bin/env Rscript
#########################################################
# TASK: Get formatted data for plots
#=======================================================================
#########################################################
# working dir and loading libraries
getwd()
setwd("~/git/LSHTM_analysis/scripts/plotting")
getwd()
source("Header_TT.R")
# source("../functions/my_pairs_panel.R") # with lower panel turned off
# source("../functions/plotting_globals.R")
# source("../functions/plotting_data.R")
# source("../functions/combining_dfs_plotting.R")
# source("../functions/bp_subcolours.R")
#********************
# cmd args passed
# in from other scripts
# to call this
#********************
#drug = 'streptomycin'
#gene = 'gid'
#====================
# variables for lig
#====================