From 73877942f4508d7890041a395400d83fce60fea8 Mon Sep 17 00:00:00 2001
From: Tanushree Tunstall <tanu@tunstall.in>
Date: Mon, 24 Aug 2020 14:38:45 +0100
Subject: [PATCH] added instructions on running plot scripts

---
 scripts/plotting/running_plot_scripts | 22 ++++++++++++++++++++++
 1 file changed, 22 insertions(+)
 create mode 100644 scripts/plotting/running_plot_scripts

diff --git a/scripts/plotting/running_plot_scripts b/scripts/plotting/running_plot_scripts
new file mode 100644
index 0000000..d2f8f50
--- /dev/null
+++ b/scripts/plotting/running_plot_scripts
@@ -0,0 +1,22 @@
+#========
+# plotting
+#========
+
+#=======================
+#1) plotting_data.R
+#=======================
+??? update how to run
+
+#=======================
+# mcsm_mean_stability.R
+#=======================
+??? update how to run
+# input: calls the "plotting_data.R"
+# output: <gene>_mean_stability.csv
+
+#======================
+# replaceBfactor_pdb.R
+#=======================
+# input: 2 files; pdb file and <gene>_mean_stability.csv (output from "mcsm_mean_stability.R")
+# output: 2 pdb files with bfactors replaced with 1) mean_duet and 2) mean_affinity values
+