tanu/LSHTM_analysis
1
0
Fork 0
Code Issues Pull requests Releases Wiki Activity

refactoring or_kin script minor changes only

Browse source
This commit is contained in:
Tanushree Tunstall 2020-07-10 12:37:41 +01:00
parent 4fd3462fc8
commit 6cedc3c14d
4 changed files with 10 additions and 15 deletions
Download patch file Download diff file Expand all files Collapse all files

6
scripts/kd_df.py
View file

@ -60,7 +60,7 @@ drug = args.drug
gene = args.gene
gene_match = gene + '_p.'
data_dir = args.datadir
datadir = args.datadir
indir = args.input_dir
outdir = args.output_dir
@ -72,9 +72,7 @@ DEBUG = args.debug
#============
# directories
#============
if data_dir:
datadir = data_dir
else:
if not datadir:
datadir = homedir + '/' + 'git/Data'
if not indir: