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updating and cleaning get_results script

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This commit is contained in:
Tanushree Tunstall 2021-02-12 12:04:49 +00:00
parent db1c950c39
commit 6c458f8883
1 changed files with 5 additions and 6 deletions
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11
dynamut/get_results_def.py
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@ -16,9 +16,8 @@ from bs4 import BeautifulSoup
import pandas as pd
from pandas.api.types import is_string_dtype
from pandas.api.types import is_numeric_dtype
#%%============================================================================
#%%
def get_results(url_file, host_url, outdir, outfile_suffix):
def get_results(url_file, host_url, output_dir, outfile_suffix):
# initilialise empty df
dynamut_results_out_df = pd.DataFrame()
with open(url_file, 'r') as f:
@ -67,9 +66,9 @@ def get_results(url_file, host_url, outdir, outfile_suffix):
#============================
# Writing results file: csv
#============================
dynamut_results_dir = outdir + '/dynamut_results'
dynamut_results_dir = output_dir + '/dynamut_results'
if not os.path.exists(dynamut_results_dir):
print('\nCreating dir: dynamut_results within:', outdir )
print('\nCreating dir: dynamut_results within:', output_dir )
os.makedirs(dynamut_results_dir)
print('\nWriting dynamut results df')
print('\nResults File:'
@ -94,7 +93,7 @@ def get_results(url_file, host_url, outdir, outfile_suffix):
#print(my_url_file_multiple)
#get_results(url_file = my_url_file_multiple
# , host_url = my_host
# , outdir = my_outdir
# , output_dir = my_outdir
# , outfile_suffix='multiple')
#=============================================
@ -104,6 +103,6 @@ def get_results(url_file, host_url, outdir, outfile_suffix):
#print(my_url_file_multiple)
#get_results(my_url_file_single
# , host_url = my_host
# , outdir = my_outdir
# , output_dir = my_outdir
# , outfile_suffix = 'single')
#%%