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updated running_plotting_scripts.R

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This commit is contained in:
Tanushree Tunstall 2021-09-07 11:16:41 +01:00
parent c9519b3b56
commit 686fd0cd80
24 changed files with 49 additions and 11 deletions
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26
scripts/plotting/running_plotting_scripts.txt
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@ -113,12 +113,28 @@ note:
- fb flag has default if not supplied
#===================
# Add LINEAGE ONE
#===================
# Lineage_bp.R
creates Count and Diversity plot
#====================================
# lineage_basic_barplots_combined.R
#====================================
#-----------------------------------------------------------------------
./lineage_basic_barplots_combined.R-d streptomycin -g gid
#-----------------------------------------------------------------------
It replaces
## lineage_basic_barplot.R
These have been moved to redundant/
sources:
## get_plotting_dfs.R
## functions//bp_lineage.R"
outputs: 1 svg in the plotdir
## basic_lineage_barplots_combined.svg
note:
- fa flag has default if not supplied
- fb flag has default if not supplied
########################################################################
# TODO