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added cmd option for dynamut2 formatting results

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This commit is contained in:
Tanushree Tunstall 2021-10-18 13:52:29 +01:00
parent 98325d763f
commit 675b222181
7 changed files with 65 additions and 16 deletions
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5
scripts/data_extraction.py
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@ -81,9 +81,6 @@ indir = args.input_dir
outdir = args.output_dir
make_dirs = args.make_dirs
#drug = 'streptomycin'
#gene = 'gid'
#%% input and output dirs and files
#=======
# dirs
@ -1373,4 +1370,4 @@ if dr_muts.isin(other_muts).sum() & other_muts.isin(dr_muts).sum() > 0:
print(u'\u2698' * 50,
'\nEnd of script: Data extraction and writing files'
'\n' + u'\u2698' * 50 )
#%% end of script
#%% end of script