From 6759649c615d82d0dfd848b52df27d21ed831b00 Mon Sep 17 00:00:00 2001 From: Tanushree Tunstall Date: Wed, 7 Jul 2021 13:12:29 +0100 Subject: [PATCH] indicated which cols are not available for pnca as I ran these scripts for generating plots for the poster --- scripts/plotting/get_plotting_dfs.R | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/scripts/plotting/get_plotting_dfs.R b/scripts/plotting/get_plotting_dfs.R index 84548ba..2483641 100644 --- a/scripts/plotting/get_plotting_dfs.R +++ b/scripts/plotting/get_plotting_dfs.R @@ -102,7 +102,7 @@ cols_to_select = c("mutationinformation", "drtype" , "duet_stability_change", "duet_outcome", "duet_scaled" , "ligand_affinity_change", "ligand_outcome", "affinity_scaled" , "ddg", "foldx_scaled", "foldx_outcome" - #, "deepddg", "deepddg_outcome" + , "deepddg", "deepddg_outcome" # comment out as not available for pnca , "asa", "rsa", "rd_values", "kd_values" , "af", "or_mychisq", "pval_fisher" , "or_fisher", "or_logistic", "pval_logistic"