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tidy up code

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This commit is contained in:
Tanushree Tunstall 2020-05-15 13:48:50 +01:00
parent f7e371a585
commit 548d9a5192
2 changed files with 4 additions and 9 deletions
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7
scripts/pdb_chain_splitter.py
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@ -59,12 +59,11 @@ def main():
for chain in chains:
chain = chain.upper()
print ('Extracting chain:', chain)
#pdb_chain_file = 'pdb_file_chain_{}.pdb'.format(chain)
#pdb_chain_file = outpath + '/' + 'pdb_file_chain_{}.pdb'.format(chain)
pdb_chain_file = outpath + '/' + outfile + '_{}.pdb'.format(chain)
pdb_chain_file = outpath + '/' + outfile + '_{}.pdb'.format(chain)
io = PDBIO()
io.set_structure(structure)
#io.save('{}'.format(pdb_chain_file), ChainSelect(chain))
io.save('{}'.format(pdb_chain_file), ChainSelect(chain))
if __name__ == "__main__":