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ran submit and get_results for one last batch for mcsm_na and did some bash formatting to get proper filenames, etc.

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This commit is contained in:
Tanushree Tunstall 2021-08-06 19:09:29 +01:00
parent 4733ec9db0
commit 50cf6ca3ac
4 changed files with 38 additions and 7 deletions
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8
mcsm_na/run_submit_mcsm_na.py
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@ -28,8 +28,10 @@ my_pdb_file = indir + '/gid_complex.pdb'
#=============================================================================
# batch 26: 25.txt # RAN: 16 Feb:
my_mutation_list = outdir + '/snp_batches/20/snp_batch_25.txt'
my_suffix = 'gid_b26'
# batch 27: 26.txt # RAN: 6 Aug:
# off by one
my_mutation_list = outdir + '/snp_batches/20/snp_batch_26.txt'
my_suffix = 'gid_b27'
#==============================================================================
#==========================
@ -43,4 +45,4 @@ submit_mcsm_na(host_url = my_host
, prediction_url = my_prediction_url
, output_dir = outdir
, outfile_suffix = my_suffix)
#%%#####################################################################
#%%#####################################################################