tanu/LSHTM_analysis
1
0
Fork 0
Code Issues Pull requests Releases Wiki Activity

ran submit and get_results for one last batch for mcsm_na and did some bash formatting to get proper filenames, etc.

Browse source
This commit is contained in:
Tanushree Tunstall 2021-08-06 19:09:29 +01:00
parent 4733ec9db0
commit 50cf6ca3ac
4 changed files with 38 additions and 7 deletions
Download patch file Download diff file Expand all files Collapse all files

2
mcsm_na/get_results_mcsm_na.py
View file

@ -40,7 +40,7 @@ def get_results(url_file, host_url, output_dir, outfile_suffix):
txt_url = f"{host_url}/mcsm_na/static/results/" + prediction_number + '.txt'
print('CHECK txt url:', txt_url)
out_filename = mcsm_na_results_dir + '/' + outfile_suffix + '_output_' + prediction_number + '.txt'
out_filename = mcsm_na_results_dir + '/' + outfile_suffix + '_output_' + prediction_number + '.txt.gz'
response_txt = requests.get(txt_url, stream = True)
if response_txt.status_code == 200:
print('\nDownloading .txt:', txt_url