tanu/LSHTM_analysis
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Merge branch 'embb_dev'

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This commit is contained in:
Tanushree Tunstall 2021-11-19 08:05:46 +00:00
commit 4f52627740
10 changed files with 51 additions and 21 deletions
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scripts/combining_dfs.py
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@ -122,7 +122,9 @@ if gene.lower() == "gid":
in_filename_mcsm = gene.lower() + '_complex_mcsm_norm_SRY.csv' # was incorrectly SAM previously
if gene.lower() == "embb":
print("\nReading mCSM file for gene:", gene)
in_filename_mcsm = gene.lower() + '_complex_mcsm_norm1.csv'
#in_filename_mcsm = gene.lower() + '_complex_mcsm_norm1.csv' #798
in_filename_mcsm = gene.lower() + '_complex_mcsm_norm2.csv' #844
if gene.lower() in gene_list_normal:
print("\nReading mCSM file for gene:", gene)
in_filename_mcsm = gene.lower() + '_complex_mcsm_norm.csv'