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ran mcsm_na for all 26 batches for gid

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This commit is contained in:
Tanushree Tunstall 2021-02-16 13:55:31 +00:00
parent c02a55c167
commit 4d3389264d
2 changed files with 12 additions and 5 deletions
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9
mcsm_na/run_submit.py
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@ -25,10 +25,13 @@ outdir = datadir + '/' + drug + '/output'
my_nuc_type = 'RNA'
my_pdb_file = indir + '/gid_complex.pdb'
#=============================================================================
# batch 6: 05.txt # RAN: 15 Feb: 16:43
my_mutation_list = outdir + '/snp_batches/20/snp_batch_05.txt'
my_suffix = 'gid_b6'
# batch 26: 25.txt # RAN: 16 Feb:
my_mutation_list = outdir + '/snp_batches/20/snp_batch_25.txt'
my_suffix = 'gid_b26'
#==============================================================================
#==========================
# CALL: submit_mcsm_na()
# Data: gid+streptomycin