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generated pncA plot for poster for ps_combined

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This commit is contained in:
Tanushree Tunstall 2021-07-07 11:38:07 +01:00
parent a6f0832a42
commit 4bf4650c88
3 changed files with 37 additions and 17 deletions
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9
scripts/plotting/subcols_axis.R
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@ -7,7 +7,7 @@ getwd()
setwd("~/git/LSHTM_analysis/scripts/plotting")
getwd()
source("plotting_data.R")
#source("get_plotting_data.R")
# should return the following dfs and directories
# my_df
# my_df_u
@ -24,11 +24,11 @@ cat(paste0("Variables imported:"
, "\ndrug:", drug
, "\ngene:", gene
, "\ngene_match:", gene_match
, "\nLength of upos:", length(upos)
#, "\nLength of upos:", length(upos)
, "\nAngstrom symbol:", angstroms_symbol))
# clear excess variable
rm(upos, dup_muts, my_df_u, my_df_u_lig)
#rm(upos, dup_muts, my_df_u, my_df_u_lig)
# This is because we want to assign the colours to my_df
# and then resubset accordingly for our plots to avoid multiple merges
@ -237,5 +237,4 @@ rm(aa_cols_ref
#######################################################################
# end of script
#######################################################################
#######################################################################