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alr config

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Tanushree Tunstall 2022-09-05 19:03:49 +01:00
parent f1f0d3e62e
commit 4a34d7a94d
1 changed files with 2 additions and 1 deletions
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config/alr.R
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@ -146,7 +146,8 @@ plp_pos_paper = sort(unique(c(66, 70, 112, 196, 227, 237, 252, 254, 255, 388)))
#add_to_plp = c(113, 227, 233, 345) # 227 not in plp and 227, 233 and 345 not with snp #add_to_plp = c(113, 227, 233, 345) # 227 not in plp and 227, 233 and 345 not with snp
#active_aa_pos = sort(unique(c(aa_pos_paper, active_aa_pos))) #active_aa_pos = sort(unique(c(aa_pos_paper, active_aa_pos)))
aa_pos_plp = sort(unique(c(plp_pos_paper, 66, 70, 112, 237, 252, 254, 255, 196, add_to_plp))) #aa_pos_plp = sort(unique(c(plp_pos_paper, 66, 70, 112, 237, 252, 254, 255, 196, add_to_plp)))
aa_pos_plp = sort(unique(c(plp_pos_paper, 66, 70, 112, 237, 252, 254, 255, 196)))
#aa_pos_dcs = sort(unique(c(aa_pos_dcs, add_to_dcs))) #aa_pos_dcs = sort(unique(c(aa_pos_dcs, add_to_dcs)))
#aa_pos_drug = aa_pos_dcs #aa_pos_drug = aa_pos_dcs