From 4733ec9db05caf4ada791afeb75de5b701545c2e Mon Sep 17 00:00:00 2001 From: Tanushree Tunstall Date: Thu, 5 Aug 2021 16:54:34 +0100 Subject: [PATCH] resuming work after conference --- scripts/plotting/get_plotting_dfs.R | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/scripts/plotting/get_plotting_dfs.R b/scripts/plotting/get_plotting_dfs.R index 2483641..e8cddd3 100644 --- a/scripts/plotting/get_plotting_dfs.R +++ b/scripts/plotting/get_plotting_dfs.R @@ -41,8 +41,8 @@ import_dirs(drug, gene) #--------------------------- if (!exists("infile_params") && exists("gene")){ #if (!is.character(infile_params) && exists("gene")){ # when running as cmd - in_filename_params = paste0(tolower(gene), "_all_params.csv") #for pncA - #in_filename_params = paste0(tolower(gene), "_comb_afor.csv") # part combined for gid + #in_filename_params = paste0(tolower(gene), "_all_params.csv") #for pncA + in_filename_params = paste0(tolower(gene), "_comb_afor.csv") # part combined for gid infile_params = paste0(outdir, "/", in_filename_params) cat("\nInput file for mcsm comb data not specified, assuming filename: ", infile_params, "\n") }