tanu/LSHTM_analysis
1
0
Fork 0
Code Issues Pull requests Releases Wiki Activity

regenerated combined_or figure with correct muts

Browse source
This commit is contained in:
Tanushree Tunstall 2020-09-09 19:03:52 +01:00
parent 41ff051dc9
commit 464186f5bd
1 changed files with 5 additions and 5 deletions
Download patch file Download diff file Expand all files Collapse all files

10
scripts/plotting/combined_or.R
View file

@ -108,8 +108,8 @@ g1 = ggplot(ps_df, aes(x = factor(position)
p1 = g1 + p1 = g1 +
geom_point(aes(col = duet_outcome geom_point(aes(col = duet_outcome
#, size = or_mychisq))+ , size = or_mychisq))+
, size = or_kin)) + #, size = or_kin)) + # not good, almost like log(or)
theme(axis.text.x = element_text(size = my_ats theme(axis.text.x = element_text(size = my_ats
, angle = 90 , angle = 90
, hjust = 1 , hjust = 1
@ -148,8 +148,8 @@ g2 = ggplot(lig_df, aes(x = factor(position)
p2 = g2 + p2 = g2 +
geom_point(aes(col = ligand_outcome geom_point(aes(col = ligand_outcome
#, size = or_mychisq))+ , size = or_mychisq))+
, size = or_kin)) + #, size = or_kin)) + # not good! almost like log(or)
theme(axis.text.x = element_text(size = my_ats theme(axis.text.x = element_text(size = my_ats
, angle = 90 , angle = 90
, hjust = 1 , hjust = 1
@ -178,7 +178,7 @@ p2
#====================== #======================
svg(plot_or_combined, width = 32, height = 12) svg(plot_or_combined, width = 32, height = 12)
svg(plot_or_kin_combined, width = 32, height = 12) #svg(plot_or_kin_combined, width = 32, height = 12)
theme_set(theme_gray()) # to preserve default theme theme_set(theme_gray()) # to preserve default theme