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added logo_plot function and test to check it

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Tanushree Tunstall 2022-01-13 18:55:13 +00:00
parent 344a74a9e1
commit 426a5cb0b5
2 changed files with 200 additions and 0 deletions
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scripts/functions/tests/test_logo_plots_func.R Normal file
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#source("~/git/LSHTM_analysis/config/gid.R")
#source("~/git/LSHTM_analysis/scripts/plotting/get_plotting_dfs.R")
LogoPlotCustomH (plotdf = merged_df3
, x_axis_colname = "position"
, y_axis_colname = "or_mychisq"
, symbol_colname = "mutant_type"
, y_axis_log = T
, log_value = log10
, my_logo_col = 'hydrophobicity'
#, theme_bgc
# , xfont_bgc
# , yfont_bgc
, x_lab = "Position"
, y_lab = "Odds Ratio"
, x_ats = 12 # text size
, x_tangle = 90 # text angle
, y_ats = 22
, y_tangle = 0
, x_tts = 25 # title size
, y_tts = 20
, leg_pos = "none"
, leg_ts = 15 # leg text size
, leg_tts = 16 # leg title size
)