change more hardcoded CPU counts to os.cpu_count()

scripts/ml/combined_model/cm_logo_skf.py

@@ -185,7 +185,7 @@ def CMLogoSkf(combined_df
                         , run_blind_test = True
                         , return_formatted_output = True
                         , random_state = 42
-                        , n_jobs = 10
+                        , n_jobs = os.cpu_count() # the number of jobs should equal the number of CPU cores
                         )
         
         cD3_v2.to_csv(outFile)

scripts/ml/ml_functions/FS.py

@@ -112,7 +112,7 @@ def fsgs_rfecv(input_df
          , resampling_type = 'none'
          , verbose = 3
          , random_state = 42
-         , n_jobs = 10
+         , n_jobs = os.cpu_count()
          ):
     '''
     returns

scripts/ml/ml_functions/MultClfs_logo.py

@@ -78,7 +78,7 @@ import itertools
 from sklearn.model_selection import LeaveOneGroupOut
 #%% GLOBALS
 rs = {'random_state': 42}
-njobs = {'n_jobs': 10}
+njobs = {'n_jobs': os.cpu_count() } # the number of jobs should equal the number of CPU cores
 
 scoring_fn =  ({ 'mcc'        : make_scorer(matthews_corrcoef)
                 , 'fscore'    : make_scorer(f1_score)

scripts/ml/ml_functions/MultClfs_logo_skf.py

@@ -152,7 +152,7 @@ def MultModelsCl_logo_skf(input_df
                        , run_blind_test = True
                        , return_formatted_output = True
                        , random_state = 42
-                       , n_jobs = 10
+                       , n_jobs = os.cpu_count() # the number of jobs should equal the number of CPU cores
                        , ):
 
     '''