diff --git a/meta_data_analysis/kd.py b/meta_data_analysis/kd.py index 0081eef..a986175 100644 --- a/meta_data_analysis/kd.py +++ b/meta_data_analysis/kd.py @@ -18,11 +18,11 @@ import pandas as pd import numpy as np import sys, os #%% -# specify variables +# specify input and output variables +homedir = os.path.expanduser('~') #======= # input #======= -homedir = os.path.expanduser('~') indir = 'git/Data/pyrazinamide/input/original' in_filename = "3pl1.fasta.txt" infile = homedir + '/' + indir + '/' + in_filename