diff --git a/scripts/plotting/notes b/scripts/plotting/notes index 5cbe303..1dbb644 100644 --- a/scripts/plotting/notes +++ b/scripts/plotting/notes @@ -72,5 +72,17 @@ table(snpsBYpos_df$snpsBYpos) #====================== dr_mutations_pyrazinamide : 227 other_mutations_pyrazinamide : 197 - + + +#====================== +# suppl tables +#====================== + +# sorted by position + +cols_to_output = c("mutationinformation", "mutation_info", "af", "or_mychisq", "neglogpval_fisher", "or_kin", "neglog_pwald_kin" +, "duet_stability_change", "duet_outcome", "ligand_distance", "ligand_affinity_change", "ligand_outcome") + +# remove the ligand distance plot from "other plots" +