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stil fiddling iwth combining dfs

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This commit is contained in:
Tanushree Tunstall 2020-07-03 19:22:46 +01:00
parent 90cbb49560
commit 262bd79204
2 changed files with 118 additions and 86 deletions
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10
scripts/combining_mcsm_foldx.py
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@ -52,7 +52,7 @@ gene = args.gene
# dirs
#======
datadir = homedir + '/' + 'git/Data'
indir = datadir + '/' + drug + '/' + 'output'
indir = datadir + '/' + drug + '/' + 'input'
outdir = datadir + '/' + drug + '/' + 'output'
#=======
@ -61,10 +61,10 @@ outdir = datadir + '/' + drug + '/' + 'output'
in_filename_mcsm = gene.lower() + '_complex_mcsm_norm.csv'
in_filename_foldx = gene.lower() + '_foldx.csv'
infile_mcsm = indir + '/' + in_filename_mcsm
infile_foldx = indir + '/' + in_filename_foldx
infile_mcsm = outdir + '/' + in_filename_mcsm
infile_foldx = outdir + '/' + in_filename_foldx
print('\nInput path:', indir
print('\nInput path:', outdir
, '\nInput filename1:', in_filename_mcsm
, '\nInput filename2:', in_filename_foldx
, '\n============================================================')
@ -109,4 +109,4 @@ def main():
if __name__ == '__main__':
main()
#=======================================================================
#%% end of script
#%% end of script