From 18af246c24760b537e134a7867eca5701f747607 Mon Sep 17 00:00:00 2001 From: Tanushree Tunstall Date: Fri, 4 Jun 2021 09:38:17 +0100 Subject: [PATCH] saving before starting work --- scripts/count.py | 1 - 1 file changed, 1 deletion(-) diff --git a/scripts/count.py b/scripts/count.py index c82f805..cb6d44b 100755 --- a/scripts/count.py +++ b/scripts/count.py @@ -311,7 +311,6 @@ n_stop*100 #0.11 all_tot = n_del*100 + n_ins*100 + n_stop*100 #1.2 #%% count pncA WT - wt_gene = meta_data.loc[meta_data[dr_muts_col].str.contains('WT', na = False, regex = True, case = False) | meta_data[other_muts_col].str.contains('WT', na = False, regex = True, case = False) ] meta_data['muts_and_lineage'] = meta_data[dr_muts_col] + meta_data[other_muts_col] + meta_data['lineage']