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fix HARDCODED HOMEDIRS

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This commit is contained in:
Tanushree Tunstall 2023-02-19 18:01:03 +00:00
parent db7e2912e1
commit 1571f430a5
50 changed files with 78 additions and 78 deletions
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4
scripts/plotting/mcsm_affinity_data_only.R
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@ -5,7 +5,7 @@
#source("~/git/LSHTM_analysis/config/katg.R")
source("~/git/LSHTM_analysis/config/rpob.R")
source("/home/tanu/git/LSHTM_analysis/my_header.R")
source("~/git/LSHTM_analysis/my_header.R")
#########################################################
# TASK: Generate averaged affinity values
# across all affinity tools for a given structure
@ -32,7 +32,7 @@ print(paste0("Output file:", outfile_mean_aff_priorty))
#=============
# Input
#=============
df3_filename = paste0("/home/tanu/git/Data/", drug, "/output/", tolower(gene), "_merged_df3.csv")
df3_filename = paste0("~/git/Data/", drug, "/output/", tolower(gene), "_merged_df3.csv")
df3 = read.csv(df3_filename)
length(df3$mutationinformation)