diff --git a/mcsm_analysis/pyrazinamide/scripts/plotting/lineage_dist_PS.R b/mcsm_analysis/pyrazinamide/scripts/plotting/lineage_dist_PS.R index 550ca5d..703a206 100644 --- a/mcsm_analysis/pyrazinamide/scripts/plotting/lineage_dist_PS.R +++ b/mcsm_analysis/pyrazinamide/scripts/plotting/lineage_dist_PS.R @@ -44,11 +44,11 @@ source("../combining_two_df.R") ########################### # uncomment as necessary -#!!!!!!!!!!!!!!!!!!!!!!! +#%%%%%%%%%%%%%%%%%%%%%%%% # REASSIGNMENT my_df = merged_df2 #my_df = merged_df2_comp -#!!!!!!!!!!!!!!!!!!!!!!! +#%%%%%%%%%%%%%%%%%%%%%%%% # delete variables not required rm(merged_df2, merged_df2_comp, merged_df3, merged_df3_comp) @@ -135,10 +135,10 @@ if(sum(table(plot_df$lineage)[r1]) == nrow(df_lin)) { print("Error!: check your numbers") } -#!!!!!!!!!!!!!!!!!!!!!!!!! +#%%%%%%%%%%%%%%%%%%%%%%%%% # REASSIGNMENT df <- df_lin -#!!!!!!!!!!!!!!!!!!!!!!!!! +#%%%%%%%%%%%%%%%%%%%%%%%%% rm(df_lin)