From 06f2ce97b6c84b88408eb566f865086c94b86f37 Mon Sep 17 00:00:00 2001 From: Tanushree Tunstall Date: Sat, 9 Jul 2022 11:02:37 +0100 Subject: [PATCH] minor var name fix for MultClfs.py and ml_iterator --- scripts/ml/ml_functions/MultClfs.py | 5 ++--- scripts/ml/ml_iterator.py | 2 +- 2 files changed, 3 insertions(+), 4 deletions(-) diff --git a/scripts/ml/ml_functions/MultClfs.py b/scripts/ml/ml_functions/MultClfs.py index 7a92c00..1f46df9 100755 --- a/scripts/ml/ml_functions/MultClfs.py +++ b/scripts/ml/ml_functions/MultClfs.py @@ -144,10 +144,9 @@ scoreBT_mapD = {'bts_mcc' : 'MCC' ############################ # Multiple Classification - Model Pipeline def MultModelsCl(input_df, target - #, skf_cv , sel_cv - #, blind_test_df - #, blind_test_target + , blind_test_df + , blind_test_target , tts_split_type , resampling_type = 'none' # default diff --git a/scripts/ml/ml_iterator.py b/scripts/ml/ml_iterator.py index 3405965..7f0aafb 100755 --- a/scripts/ml/ml_iterator.py +++ b/scripts/ml/ml_iterator.py @@ -90,7 +90,7 @@ for gene, drug in ml_gene_drugD.items(): for k, v in paramD.items(): scoresD = MultModelsCl(**paramD[k] , tts_split_type = split_type - , skf_cv = skf_cv + , sel_cv = skf_cv , blind_test_df = tempD['X_bts'] , blind_test_target = tempD['y_bts'] , add_cm = True