tanu/LSHTM_analysis
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Tanushree Tunstall 2020-09-10 19:16:24 +01:00
parent 14182df12f
commit 0699ebfc3a
1 changed files with 12 additions and 0 deletions
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12
scripts/plotting/other_plots_data.R
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@ -18,6 +18,17 @@ source("combining_dfs_plotting.R")
rm(merged_df2, merged_df2_comp, merged_df2_lig, merged_df2_comp_lig rm(merged_df2, merged_df2_comp, merged_df2_lig, merged_df2_comp_lig
, merged_df3_comp, merged_df3_comp_lig , merged_df3_comp, merged_df3_comp_lig
, my_df_u, my_df_u_lig) , my_df_u, my_df_u_lig)
cols_to_select = c("mutation", "mutationinformation"
, "wild_type", "position", "mutant_type"
, "mutation_info")
merged_df3_short = merged_df3[, cols_to_select]
# write merged_df3 to generate structural figure
write.csv(merged_df3_short, "merged_df3_short.csv")
#======================================================================== #========================================================================
#%%%%%%%%%%%%%%%%%%% #%%%%%%%%%%%%%%%%%%%
# REASSIGNMENT: PS # REASSIGNMENT: PS
@ -74,6 +85,7 @@ if ( table(dr_muts_names%in%other_muts_names)[[1]] == length(dr_muts_names) &&
quit() quit()
} }
#%%%%%%%%%%%%%%%%%%% #%%%%%%%%%%%%%%%%%%%
# REASSIGNMENT: LIG # REASSIGNMENT: LIG
#%%%%%%%%%%%%%%%%%%%% #%%%%%%%%%%%%%%%%%%%%