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handled rpob 5uhc position offset in mcsm_ppi2

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Tanushree Tunstall 2022-01-04 10:45:29 +00:00
parent 46e2c93885
commit 00b84ccb1c
30 changed files with 395 additions and 63 deletions
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mcsm_ppi2/run_format_results_mcsm_ppi2.py
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@ -67,7 +67,7 @@ outfile_mcsm_ppi2_f = outdir_ppi2 + gene.lower() + '_complex_mcsm_ppi2_norm.csv'
# Data: gid+streptomycin
#==========================
print('Formatting results for:', infile_mcsm_ppi2)
mcsm_ppi2_df_f = format_mcsm_ppi2_output(mcsm_ppi2_output_csv = infile_mcsm_ppi2)
mcsm_ppi2_df_f = format_mcsm_ppi2_output(mcsm_ppi2_output_csv = infile_mcsm_ppi2, gene_name = gene)
# writing file
print('Writing formatted df to csv')